SRX14853140
GSM6043917: PGR d1 org; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
PGR

Cell type

Cell type Class
Uterus
Cell type
Uterine epithelial cells
NA
NA

Attributes by original data submitter

Sample

source_name
uterine epithelial cells
sample source
donor1
sample type
organoid culture
treament
E2+MPA
antibody
PGR (Santa Cruz sc-7208)

Sequenced DNA Library

library_name
GSM6043917
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Chromatin samples were prepared by Active Motif Services - Factor Path assays Libraries were prepared by Active Motif Services - Factor Path assays

Sequencing Platform

instrument_model
NextSeq 500

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
45861779
Reads aligned (%)
89.3
Duplicates removed (%)
59.6
Number of peaks
18551 (qval < 1E-05)

hg19

Number of total reads
45861779
Reads aligned (%)
88.6
Duplicates removed (%)
60.7
Number of peaks
18458 (qval < 1E-05)

Base call quality data from DBCLS SRA